The following research labs are affiliated with the Wireless Engineering Research and Education Center:
- Sensors, Transducers, Optics, Research and Modeling Lab - directed by Mark L. Adams
- Auburn RFIC Design and Testing Laboratory - directed by Fa Dai
- The SiGe/Mextram group - directed by Guofu Niu
- Collaborative Robotics Research Lab - directed by Thaddeus Roppel
- Advanced WirelesS and Multimedia Networking Lab (AWSM Lab) - directed by Shiwen Mao
- Data Science Lab - directed by Wei-Shinn (Jeff) Ku
- Data Storage Systems - directed by Xiao Qin
- Mobile and Pervasive Computing Laboratory - directed by Alvin Lim
- Real-Time Networking Lab - directed by Yin Sun